Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.44□□□□□ -1.38
CLRN1P58418 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 HSPD1P14-201ENST00000432666 1618 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC027279.1-201ENST00000568885 4284 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 Y_RNA.209-201ENST00000364156 111 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 ARMCX7P-201ENST00000372828 562 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 TAS2R2P-201ENST00000421146 910 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 FABP5P1-201ENST00000423401 411 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 BX119917.1-201ENST00000432517 502 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 CLNS1AP1-201ENST00000435954 682 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC093720.1-201ENST00000505681 714 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC146944.3-201ENST00000509969 371 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC119751.5-201ENST00000514077 770 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 IGLV1-62-201ENST00000518003 441 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 OR8G5-201ENST00000524943 1041 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 AP003066.2-201ENST00000529375 555 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 AC018523.1-201ENST00000534211 512 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 ATP5J2P4-201ENST00000538774 267 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.43□□□□□ -1.38
CLRN1P58418 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 MIR3135A-201ENST00000578460 77 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 RN7SL311P-201ENST00000579858 306 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 MIR5705-201ENST00000579870 89 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC008759.3-201ENST00000613300 508 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC087893.2-201ENST00000623272 255 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC103703.1-201ENST00000634783 663 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC183089.2-201ENST00000637931 916 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 CASC19-212ENST00000641153 1287 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.43□□□□□ -1.38
CLRN1P58418 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.43□□□□□ -1.38
CLRN1P58418 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLRN1P58418 MARK2P4-201ENST00000503381 2380 ntBASIC6.43□□□□□ -1.38
CLRN1P58418 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CLRN1P58418 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 AP002364.1-201ENST00000623330 3386 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.42□□□□□ -1.38
CLRN1P58418 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 SNORA70.8-201ENST00000384231 136 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms