Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SUMO3P55854 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
SUMO3P55854 AP003119.3-201ENST00000566747 4192 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.46□□□□□ -1.37
SUMO3P55854 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
SUMO3P55854 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SUMO3P55854 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SUMO3P55854 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.46□□□□□ -1.37
SUMO3P55854 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.46□□□□□ -1.38
SUMO3P55854 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SUMO3P55854 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 RNU6-1251P-201ENST00000364502 107 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.46□□□□□ -1.38
SUMO3P55854 RN7SKP232-201ENST00000410170 290 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.46□□□□□ -1.38
SUMO3P55854 OR52N3P-201ENST00000413417 934 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.46□□□□□ -1.38
SUMO3P55854 AL157698.1-201ENST00000415190 1011 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 ETF1P1-206ENST00000427296 984 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC007563.3-201ENST00000433233 371 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 RPL29P7-201ENST00000440227 457 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC245517.2-201ENST00000442890 346 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 DBIL5P2-201ENST00000443827 253 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 RPL21P33-201ENST00000444831 484 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 SDHCP3-201ENST00000445371 506 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.46□□□□□ -1.38
SUMO3P55854 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC063955.1-201ENST00000462872 685 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 ATP5G1P3-201ENST00000463301 410 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.46□□□□□ -1.38
SUMO3P55854 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 AC024451.1-201ENST00000508013 779 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 SCARNA6-201ENST00000515982 265 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 HMGB1P46-201ENST00000520062 610 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 GLYATL1P4-201ENST00000529326 906 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AL121839.1-201ENST00000556233 1185 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC096708.2-201ENST00000577676 512 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 OOSP1P2-201ENST00000579644 351 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.46□□□□□ -1.38
SUMO3P55854 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.46□□□□□ -1.38
SUMO3P55854 AC092032.1-201ENST00000603090 165 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC012511.1-201ENST00000608140 449 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC063962.1-201ENST00000608199 521 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.46□□□□□ -1.38
SUMO3P55854 MIR8089-201ENST00000620165 82 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.46□□□□□ -1.38
SUMO3P55854 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 AL139254.2-202ENST00000641937 1156 ntBASIC6.46□□□□□ -1.38
SUMO3P55854 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.46□□□□□ -1.38
SUMO3P55854 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.46□□□□□ -1.38
SUMO3P55854 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SUMO3P55854 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SUMO3P55854 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SUMO3P55854 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.45□□□□□ -1.38
SUMO3P55854 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SUMO3P55854 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms