Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CACNA2D1P54289 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 SNORA40.4-201ENST00000390971 128 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AL773545.3-201ENST00000414297 706 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC117434.1-201ENST00000419971 836 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 PA2G4P1-201ENST00000442248 1197 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 RPL23AP28-201ENST00000448062 470 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC074386.1-206ENST00000487102 761 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 RPL23AP80-201ENST00000495605 424 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC009567.2-201ENST00000502989 349 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 NREP-217ENST00000509025 987 ntTSL 3 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AP002981.1-201ENST00000517692 975 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 EEF1B2P2-201ENST00000519625 676 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC087752.2-201ENST00000521219 281 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC140063.1-201ENST00000541343 259 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC020978.9-201ENST00000624380 1141 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC106730.3-201ENST00000624568 641 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC080188.3-201ENST00000624842 748 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AL138960.2-201ENST00000625145 535 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC027559.1-201ENST00000636288 271 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 AL162456.1-201ENST00000634535 2006 ntBASIC7.26□□□□□ -1.25
CACNA2D1P54289 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CACNA2D1P54289 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CACNA2D1P54289 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AC004023.1-201ENST00000561473 1744 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 PABPC1P8-201ENST00000452851 2086 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 RNU1-24P-201ENST00000364285 165 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 MIR1204-201ENST00000408388 67 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 NPM1P36-201ENST00000415681 835 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AC000089.1-201ENST00000424559 801 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 PAICSP2-201ENST00000429118 1150 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AL121578.2-201ENST00000448797 447 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 RBMY2BP-202ENST00000451071 1156 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 EIF2S2P5-201ENST00000457635 968 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 RN7SL70P-201ENST00000478322 302 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 CTSLP2-201ENST00000580501 394 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.25□□□□□ -1.25
CACNA2D1P54289 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 SNORA16A-202ENST00000628458 135 ntBASIC7.25□□□□□ -1.25
CACNA2D1P54289 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CACNA2D1P54289 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms