Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 AP003175.1-201ENST00000641383 6658 ntBASIC7.25□□□□□ -1.25
NEK3P51956 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
NEK3P51956 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 AC087565.3-202ENST00000642085 1603 ntBASIC7.24□□□□□ -1.25
NEK3P51956 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
NEK3P51956 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 RNU6-618P-201ENST00000363518 112 ntBASIC7.24□□□□□ -1.25
NEK3P51956 RNA5SP429-201ENST00000363688 109 ntBASIC7.24□□□□□ -1.25
NEK3P51956 RNA5SP114-201ENST00000363780 113 ntBASIC7.24□□□□□ -1.25
NEK3P51956 AL589655.1-201ENST00000405398 482 ntBASIC7.24□□□□□ -1.25
NEK3P51956 MRPL32P1-201ENST00000406301 247 ntBASIC7.24□□□□□ -1.25
NEK3P51956 RN7SKP85-201ENST00000411349 318 ntBASIC7.24□□□□□ -1.25
NEK3P51956 RAB9AP4-201ENST00000415230 609 ntBASIC7.24□□□□□ -1.25
NEK3P51956 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.24□□□□□ -1.25
NEK3P51956 AC104698.1-201ENST00000435671 276 ntBASIC7.24□□□□□ -1.25
NEK3P51956 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.24□□□□□ -1.25
NEK3P51956 SRP68P2-201ENST00000456184 254 ntBASIC7.24□□□□□ -1.25
NEK3P51956 RPLP0P1-201ENST00000457002 361 ntBASIC7.24□□□□□ -1.25
NEK3P51956 WBP1LP1-201ENST00000460451 896 ntBASIC7.24□□□□□ -1.25
NEK3P51956 RN7SL149P-201ENST00000465197 281 ntBASIC7.24□□□□□ -1.25
NEK3P51956 RPSAP48-201ENST00000466509 889 ntBASIC7.24□□□□□ -1.25
NEK3P51956 PGBD4P1-201ENST00000473644 407 ntBASIC7.24□□□□□ -1.25
NEK3P51956 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.24□□□□□ -1.25
NEK3P51956 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.24□□□□□ -1.25
NEK3P51956 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.24□□□□□ -1.25
NEK3P51956 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.24□□□□□ -1.25
NEK3P51956 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.24□□□□□ -1.25
NEK3P51956 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.24□□□□□ -1.25
NEK3P51956 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.24□□□□□ -1.25
NEK3P51956 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.24□□□□□ -1.25
NEK3P51956 AC091932.1-201ENST00000569381 427 ntBASIC7.24□□□□□ -1.25
NEK3P51956 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.24□□□□□ -1.25
NEK3P51956 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.24□□□□□ -1.25
NEK3P51956 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.24□□□□□ -1.25
NEK3P51956 AC068802.1-201ENST00000603420 732 ntBASIC7.24□□□□□ -1.25
NEK3P51956 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.24□□□□□ -1.25
NEK3P51956 AP005131.7-201ENST00000610087 611 ntBASIC7.24□□□□□ -1.25
NEK3P51956 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.24□□□□□ -1.25
NEK3P51956 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.24□□□□□ -1.25
NEK3P51956 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC7.24□□□□□ -1.25
NEK3P51956 AC006453.3-201ENST00000635891 377 ntBASIC7.24□□□□□ -1.25
NEK3P51956 MAPK10-350ENST00000641777 965 ntBASIC7.24□□□□□ -1.25
NEK3P51956 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.24□□□□□ -1.25
NEK3P51956 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NEK3P51956 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.24□□□□□ -1.25
NEK3P51956 AC073342.2-201ENST00000595842 1800 ntBASIC7.24□□□□□ -1.25
NEK3P51956 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
NEK3P51956 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.24□□□□□ -1.25
NEK3P51956 AC005034.3-201ENST00000604845 1747 ntBASIC7.24□□□□□ -1.25
NEK3P51956 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NEK3P51956 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 MAPK10-270ENST00000641102 3538 ntBASIC7.23□□□□□ -1.25
NEK3P51956 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.23□□□□□ -1.25
NEK3P51956 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NEK3P51956 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 RNU1-24P-201ENST00000364285 165 ntBASIC7.23□□□□□ -1.25
NEK3P51956 SNORA70.5-201ENST00000365519 135 ntBASIC7.23□□□□□ -1.25
NEK3P51956 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.23□□□□□ -1.25
NEK3P51956 RNU6-883P-201ENST00000384597 107 ntBASIC7.23□□□□□ -1.25
NEK3P51956 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NEK3P51956 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.23□□□□□ -1.25
NEK3P51956 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.23□□□□□ -1.25
NEK3P51956 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.23□□□□□ -1.25
NEK3P51956 AC017019.1-201ENST00000426129 261 ntBASIC7.23□□□□□ -1.25
NEK3P51956 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.23□□□□□ -1.25
NEK3P51956 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms