Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX3P41225 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 LDHAP5-201ENST00000394996 622 ntBASIC6.36□□□□□ -1.39
SOX3P41225 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 RN7SKP91-201ENST00000410852 288 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 RPLP1P10-201ENST00000413972 339 ntBASIC6.36□□□□□ -1.39
SOX3P41225 CDK7P1-201ENST00000434574 693 ntBASIC6.36□□□□□ -1.39
SOX3P41225 PSMD8P1-201ENST00000436275 769 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 BZW1P1-201ENST00000454901 1240 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC135721.2-201ENST00000464237 300 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX3P41225 RN7SL790P-201ENST00000474043 298 ntBASIC6.36□□□□□ -1.39
SOX3P41225 RN7SL350P-201ENST00000492591 299 ntBASIC6.36□□□□□ -1.39
SOX3P41225 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX3P41225 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 AP005902.2-201ENST00000518393 307 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 OR7E154P-201ENST00000525174 932 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 AC016144.1-201ENST00000548175 1087 ntBASIC6.36□□□□□ -1.39
SOX3P41225 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX3P41225 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 AC007255.2-201ENST00000604053 631 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 AC005858.3-201ENST00000624756 589 ntBASIC6.36□□□□□ -1.39
SOX3P41225 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.36□□□□□ -1.39
SOX3P41225 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX3P41225 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX3P41225 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX3P41225 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX3P41225 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SOX3P41225 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SOX3P41225 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX3P41225 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SOX3P41225 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX3P41225 RN7SKP47-201ENST00000365347 328 ntBASIC6.35□□□□□ -1.39
SOX3P41225 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX3P41225 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SOX3P41225 AC083855.1-201ENST00000440041 258 ntBASIC6.35□□□□□ -1.39
SOX3P41225 GOT2P2-201ENST00000450663 1251 ntBASIC6.35□□□□□ -1.39
SOX3P41225 RPL7AP71-201ENST00000451120 739 ntBASIC6.35□□□□□ -1.39
SOX3P41225 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 NMNAT1P3-201ENST00000457517 888 ntBASIC6.35□□□□□ -1.39
SOX3P41225 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 RPL23AP80-201ENST00000495605 424 ntBASIC6.35□□□□□ -1.39
SOX3P41225 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.35□□□□□ -1.39
SOX3P41225 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SOX3P41225 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX3P41225 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 EEF1B2P2-201ENST00000519625 676 ntBASIC6.35□□□□□ -1.39
SOX3P41225 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX3P41225 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.35□□□□□ -1.39
SOX3P41225 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX3P41225 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 AC005899.6-201ENST00000620729 297 ntBASIC6.35□□□□□ -1.39
SOX3P41225 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.35□□□□□ -1.39
SOX3P41225 AC017037.4-201ENST00000624526 826 ntBASIC6.35□□□□□ -1.39
SOX3P41225 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 AC135068.11-201ENST00000636378 921 ntBASIC6.35□□□□□ -1.39
SOX3P41225 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 AC004023.1-201ENST00000561473 1744 ntBASIC6.35□□□□□ -1.39
SOX3P41225 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX3P41225 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX3P41225 AC022905.1-201ENST00000503430 3048 ntBASIC6.35□□□□□ -1.39
SOX3P41225 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms