Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
APOEP02649 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 RN7SKP271-201ENST00000410528 320 ntBASIC7.11□□□□□ -1.27
APOEP02649 RN7SKP91-201ENST00000410852 288 ntBASIC7.11□□□□□ -1.27
APOEP02649 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.11□□□□□ -1.27
APOEP02649 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 GAPDHP57-201ENST00000424400 585 ntBASIC7.11□□□□□ -1.27
APOEP02649 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.11□□□□□ -1.27
APOEP02649 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.11□□□□□ -1.27
APOEP02649 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.11□□□□□ -1.27
APOEP02649 RN7SL372P-201ENST00000461982 298 ntBASIC7.11□□□□□ -1.27
APOEP02649 AC022730.1-201ENST00000473114 568 ntBASIC7.11□□□□□ -1.27
APOEP02649 RN7SL187P-201ENST00000495587 303 ntBASIC7.11□□□□□ -1.27
APOEP02649 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC7.11□□□□□ -1.27
APOEP02649 AC021220.1-201ENST00000507445 630 ntBASIC7.11□□□□□ -1.27
APOEP02649 OR10J9P-201ENST00000511932 987 ntBASIC7.11□□□□□ -1.27
APOEP02649 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC7.11□□□□□ -1.27
APOEP02649 AC068408.1-201ENST00000577406 1144 ntBASIC7.11□□□□□ -1.27
APOEP02649 SNORA70D-201ENST00000578836 135 ntBASIC7.11□□□□□ -1.27
APOEP02649 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.11□□□□□ -1.27
APOEP02649 AC022001.1-201ENST00000605193 268 ntBASIC7.11□□□□□ -1.27
APOEP02649 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
APOEP02649 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.11□□□□□ -1.27
APOEP02649 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 MARK2P4-201ENST00000503381 2380 ntBASIC7.11□□□□□ -1.27
APOEP02649 AC095038.1-201ENST00000429248 1591 ntBASIC7.11□□□□□ -1.27
APOEP02649 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
APOEP02649 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.1□□□□□ -1.27
APOEP02649 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.1□□□□□ -1.27
APOEP02649 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
APOEP02649 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 RN7SKP130-201ENST00000364924 301 ntBASIC7.1□□□□□ -1.27
APOEP02649 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.1□□□□□ -1.27
APOEP02649 LDHAP5-201ENST00000394996 622 ntBASIC7.1□□□□□ -1.27
APOEP02649 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.1□□□□□ -1.27
APOEP02649 AC000089.1-201ENST00000424559 801 ntBASIC7.1□□□□□ -1.27
APOEP02649 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.1□□□□□ -1.27
APOEP02649 RPL7AP71-201ENST00000451120 739 ntBASIC7.1□□□□□ -1.27
APOEP02649 MEF2AP1-201ENST00000454867 863 ntBASIC7.1□□□□□ -1.27
APOEP02649 AC083806.1-201ENST00000468934 316 ntBASIC7.1□□□□□ -1.27
APOEP02649 AC096754.1-201ENST00000508904 818 ntBASIC7.1□□□□□ -1.27
APOEP02649 SNX18P23-201ENST00000510867 677 ntBASIC7.1□□□□□ -1.27
APOEP02649 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.1□□□□□ -1.27
APOEP02649 AC087752.2-201ENST00000521219 281 ntBASIC7.1□□□□□ -1.27
APOEP02649 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.1□□□□□ -1.27
APOEP02649 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
APOEP02649 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.1□□□□□ -1.27
APOEP02649 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC7.1□□□□□ -1.27
APOEP02649 RN7SL32P-201ENST00000580514 281 ntBASIC7.1□□□□□ -1.27
APOEP02649 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.1□□□□□ -1.27
APOEP02649 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.1□□□□□ -1.27
APOEP02649 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.1□□□□□ -1.27
APOEP02649 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 CLCA3P-203ENST00000490028 2781 ntBASIC7.1□□□□□ -1.27
APOEP02649 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.1□□□□□ -1.27
APOEP02649 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.1□□□□□ -1.27
APOEP02649 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.1□□□□□ -1.27
APOEP02649 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
APOEP02649 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
APOEP02649 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
APOEP02649 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.09□□□□□ -1.27
APOEP02649 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.09□□□□□ -1.27
APOEP02649 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.09□□□□□ -1.27
APOEP02649 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
APOEP02649 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
APOEP02649 CYCSP17-201ENST00000407870 315 ntBASIC7.09□□□□□ -1.27
APOEP02649 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.09□□□□□ -1.27
APOEP02649 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.09□□□□□ -1.27
APOEP02649 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.09□□□□□ -1.27
APOEP02649 SUMO2P10-201ENST00000452006 288 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms