Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 AL953862.2-201ENST00000603089 820 ntBASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 OR10AE1P-201ENST00000606962 1029 ntBASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 AL391597.1-201ENST00000618707 694 ntBASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 OR5G5P-204ENST00000627642 621 ntBASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 HSPA8P17-201ENST00000427029 1382 ntBASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGB1P1B2RPK0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 SOCS5P5-201ENST00000402732 1586 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 OR51A6P-201ENST00000418680 1004 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC091492.1-201ENST00000419844 272 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AL356390.1-201ENST00000455684 397 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 RPSAP7-201ENST00000456871 885 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 PSMA6P2-201ENST00000457574 686 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 SNORA81.1-201ENST00000458922 177 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 ACTG1P20-201ENST00000486001 468 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC008677.3-201ENST00000519146 666 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC109635.6-201ENST00000525487 1113 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC008147.3-201ENST00000548666 354 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 RN7SL667P-201ENST00000582817 298 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC099654.4-201ENST00000614168 1059 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC091059.2-201ENST00000623355 614 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AP000590.1-201ENST00000624943 464 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 AC007159.1-201ENST00000566529 4706 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 MAPK10-379ENST00000642013 1385 ntBASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P1B2RPK0 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
HMGB1P1B2RPK0 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.02□□□□□ -1.28
HMGB1P1B2RPK0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 FAM32BP-201ENST00000344033 333 ntBASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 AC104297.1-201ENST00000393779 870 ntBASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 RPL5P19-201ENST00000404228 893 ntBASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 PPIAP2-201ENST00000414143 492 ntBASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 TRIM60P17-201ENST00000415181 719 ntBASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 SNX18P14-201ENST00000429308 574 ntBASIC7.02□□□□□ -1.29
HMGB1P1B2RPK0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms