Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 AC011558.1-201ENST00000623459 338 ntBASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.56■■□□□ 1.2
PTCH2Q9Y6C5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 HLA-G-202ENST00000376815 851 ntBASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 HLA-G-203ENST00000376818 1127 ntBASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 AC116562.4-202ENST00000641738 218 ntBASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.55■■□□□ 1.2
PTCH2Q9Y6C5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 AC011484.1-201ENST00000377652 1995 ntBASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCH2Q9Y6C5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 AL691432.3-201ENST00000621860 400 ntBASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.53■■□□□ 1.2
PTCH2Q9Y6C5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 AP000692.2-201ENST00000608391 879 ntBASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 AC012313.10-201ENST00000623509 926 ntBASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 AC141257.4-201ENST00000634557 245 ntBASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 AC136944.6-201ENST00000634818 245 ntBASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 AC005332.1-201ENST00000577698 1310 ntBASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PTCH2Q9Y6C5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
PTCH2Q9Y6C5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 AC131212.4-201ENST00000623606 975 ntBASIC22.51■■□□□ 1.19
PTCH2Q9Y6C5 MIR2861-201ENST00000636310 90 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms