Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 ECEL1P3-201ENST00000427961 737 ntBASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 Z99916.2-201ENST00000604037 246 ntBASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB1Q9Y5F3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 KRT17P3-201ENST00000420566 1262 ntBASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 PTBP1P-201ENST00000554374 1601 ntBASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 C2orf69P4-201ENST00000565394 541 ntBASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB1Q9Y5F3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 BX119927.1-201ENST00000636596 1552 ntBASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 SNORA78-201ENST00000459373 127 ntBASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 RN7SL471P-201ENST00000580476 299 ntBASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB1Q9Y5F3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 SOX15-203ENST00000570788 1093 ntBASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 AC073912.3-201ENST00000624414 853 ntBASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB1Q9Y5F3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 AL031963.3-201ENST00000606441 850 ntBASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 TCF3P1-201ENST00000423021 1937 ntBASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB1Q9Y5F3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms