Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 BX119927.1-201ENST00000636596 1552 ntBASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
LSM5Q9Y4Y9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LSM5Q9Y4Y9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 AC053503.5-201ENST00000601508 636 ntBASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 OR6D1P-202ENST00000641007 5290 ntBASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LSM5Q9Y4Y9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 EEF1DP3-203ENST00000566025 782 ntBASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSM5Q9Y4Y9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms