Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 TERF1P5-201ENST00000477545 1207 ntBASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 KRT18P61-201ENST00000585825 1298 ntBASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 AP000974.1-201ENST00000623909 2387 ntBASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPS28Q9Y2Q9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.08■□□□□ 0.33
MRPS28Q9Y2Q9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 AC009237.14-201ENST00000609975 1594 ntBASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 AC010536.3-201ENST00000620306 533 ntBASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
MRPS28Q9Y2Q9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPS28Q9Y2Q9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms