Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.39■■□□□ 1.02
SSX2IPQ9Y2D8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SSX2IPQ9Y2D8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.39■■□□□ 1.02
SSX2IPQ9Y2D8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SSX2IPQ9Y2D8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SSX2IPQ9Y2D8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.39■■□□□ 1.02
SSX2IPQ9Y2D8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.39■■□□□ 1.02
SSX2IPQ9Y2D8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 AC004264.1-201ENST00000608354 794 ntBASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SSX2IPQ9Y2D8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSX2IPQ9Y2D8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.37■■□□□ 1.01
SSX2IPQ9Y2D8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 HTR7P1-201ENST00000538670 1336 ntBASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 AL355355.2-201ENST00000442321 338 ntBASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 AF186192.3-201ENST00000583427 947 ntBASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 AC026471.5-201ENST00000615068 467 ntBASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SSX2IPQ9Y2D8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 AC121338.2-201ENST00000622535 1744 ntBASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 AC133561.5-201ENST00000635547 218 ntBASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SSX2IPQ9Y2D8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms