Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
RIMBP3Q9UFD9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 BMF-207ENST00000559701 630 ntTSL 3 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 AP002383.4-201ENST00000442518 975 ntBASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 AC092865.5-201ENST00000545435 363 ntBASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 AL353719.1-201ENST00000566847 864 ntBASIC31.97■■■□□ 2.71
RIMBP3Q9UFD9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC31.96■■■□□ 2.71
RIMBP3Q9UFD9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RIMBP3Q9UFD9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RIMBP3Q9UFD9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
RIMBP3Q9UFD9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
RIMBP3Q9UFD9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC31.95■■■□□ 2.71
RIMBP3Q9UFD9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
RIMBP3Q9UFD9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC31.94■■■□□ 2.7
RIMBP3Q9UFD9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RIMBP3Q9UFD9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
RIMBP3Q9UFD9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RIMBP3Q9UFD9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
RIMBP3Q9UFD9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 NUS1P1-201ENST00000446295 882 ntBASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 PENK-208ENST00000523051 772 ntTSL 5 BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
RIMBP3Q9UFD9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.92■■■□□ 2.7
RIMBP3Q9UFD9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 TSSC2-201ENST00000450217 709 ntBASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 AF228730.7-201ENST00000641842 219 ntBASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RIMBP3Q9UFD9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 HBZP1-201ENST00000354915 429 ntBASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC31.9■■■□□ 2.7
RIMBP3Q9UFD9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms