Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPASTQ9UBP0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 AC012618.2-201ENST00000428058 849 ntBASIC19.77■□□□□ 0.76
SPASTQ9UBP0 SNORA78-201ENST00000459373 127 ntBASIC19.77■□□□□ 0.76
SPASTQ9UBP0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.77■□□□□ 0.76
SPASTQ9UBP0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPASTQ9UBP0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPASTQ9UBP0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 AP001412.1-201ENST00000608405 714 ntBASIC19.76■□□□□ 0.75
SPASTQ9UBP0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 AL135905.2-201ENST00000584934 1404 ntBASIC19.76■□□□□ 0.75
SPASTQ9UBP0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPASTQ9UBP0 PLK5-205ENST00000642079 1969 ntBASIC19.75■□□□□ 0.75
SPASTQ9UBP0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 AC006128.1-201ENST00000624704 1661 ntBASIC19.75■□□□□ 0.75
SPASTQ9UBP0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 AL121603.2-201ENST00000557373 2117 ntBASIC19.75■□□□□ 0.75
SPASTQ9UBP0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 RPS2P55-201ENST00000397318 883 ntBASIC19.75■□□□□ 0.75
SPASTQ9UBP0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 AC107956.1-201ENST00000494359 873 ntBASIC19.75■□□□□ 0.75
SPASTQ9UBP0 AC233702.5-201ENST00000584107 538 ntBASIC19.75■□□□□ 0.75
SPASTQ9UBP0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.75■□□□□ 0.75
SPASTQ9UBP0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPASTQ9UBP0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms