Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.69■□□□□ 0.9
PPARGC1AQ9UBK2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 KRT8P20-201ENST00000423953 1409 ntBASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 KRT8P17-201ENST00000453110 1448 ntBASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 AL391422.3-201ENST00000603791 2761 ntBASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
PPARGC1AQ9UBK2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 AL162377.1-201ENST00000618844 1793 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 HLA-G-202ENST00000376815 851 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 HLA-G-203ENST00000376818 1127 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 RNA5SP413-201ENST00000516373 109 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 CD99P1-205ENST00000527459 561 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 UNC93B5-201ENST00000530315 699 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.67■□□□□ 0.9
PPARGC1AQ9UBK2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 AL390719.1-204ENST00000412397 1219 ntBASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 SMG8-203ENST00000578922 2178 ntBASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPARGC1AQ9UBK2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPARGC1AQ9UBK2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PPARGC1AQ9UBK2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.64■□□□□ 0.9
PPARGC1AQ9UBK2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPARGC1AQ9UBK2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms