Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 AC139887.4-201ENST00000607877 719 ntBASIC19.8■□□□□ 0.76
NCDNQ9UBB6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NCDNQ9UBB6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 AC091390.4-202ENST00000476426 537 ntBASIC19.79■□□□□ 0.76
NCDNQ9UBB6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 IER3-202ENST00000376377 1350 ntBASIC19.79■□□□□ 0.76
NCDNQ9UBB6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.79■□□□□ 0.76
NCDNQ9UBB6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 DGCR10-201ENST00000609839 495 ntBASIC19.78■□□□□ 0.76
NCDNQ9UBB6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 FAM87A-204ENST00000613235 858 ntBASIC19.78■□□□□ 0.76
NCDNQ9UBB6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCDNQ9UBB6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 HMGA1P5-201ENST00000412453 271 ntBASIC19.77■□□□□ 0.76
NCDNQ9UBB6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCDNQ9UBB6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCDNQ9UBB6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NCDNQ9UBB6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.77■□□□□ 0.75
NCDNQ9UBB6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 TSPY5P-201ENST00000426936 936 ntBASIC19.76■□□□□ 0.75
NCDNQ9UBB6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 AC097488.1-201ENST00000507834 756 ntBASIC19.76■□□□□ 0.75
NCDNQ9UBB6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 AL121956.5-201ENST00000625261 221 ntBASIC19.76■□□□□ 0.75
NCDNQ9UBB6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.76■□□□□ 0.75
NCDNQ9UBB6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCDNQ9UBB6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms