Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 AC133681.1-201ENST00000465482 601 ntBASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 FEM1AP1-201ENST00000431297 1995 ntBASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 AP005212.1-201ENST00000581547 1997 ntBASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 KRT16P6-202ENST00000425692 1426 ntBASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX43Q9NXZ2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 RNF165-205ENST00000588679 2904 ntBASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX43Q9NXZ2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 AC110285.5-201ENST00000611501 352 ntBASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX43Q9NXZ2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
DDX43Q9NXZ2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 AC008550.1-201ENST00000511500 884 ntBASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms