Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
HPS4Q9NQG7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS4Q9NQG7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPS4Q9NQG7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 CD177P1-201ENST00000606252 935 ntBASIC20.6■□□□□ 0.89
HPS4Q9NQG7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 AL353708.3-201ENST00000610272 989 ntBASIC20.6■□□□□ 0.89
HPS4Q9NQG7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 AC097493.4-201ENST00000641197 219 ntBASIC20.6■□□□□ 0.89
HPS4Q9NQG7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.6■□□□□ 0.89
HPS4Q9NQG7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HPS4Q9NQG7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 FAM197Y1-201ENST00000421178 764 ntBASIC20.58■□□□□ 0.89
HPS4Q9NQG7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HPS4Q9NQG7 AC010331.1-201ENST00000611423 582 ntBASIC20.58■□□□□ 0.89
HPS4Q9NQG7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HPS4Q9NQG7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HPS4Q9NQG7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HPS4Q9NQG7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HPS4Q9NQG7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 AL353807.1-201ENST00000427475 662 ntBASIC20.57■□□□□ 0.88
HPS4Q9NQG7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.57■□□□□ 0.88
HPS4Q9NQG7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 AL121603.2-201ENST00000557373 2117 ntBASIC20.56■□□□□ 0.88
HPS4Q9NQG7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 AL355355.2-201ENST00000442321 338 ntBASIC20.56■□□□□ 0.88
HPS4Q9NQG7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms