Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 BX276092.2-201ENST00000417668 665 ntBASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 AL356652.1-201ENST00000615962 565 ntBASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 AC133041.1-202ENST00000642053 222 ntBASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK4Q9HAZ1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 AL162377.1-201ENST00000618844 1793 ntBASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 AC116562.4-201ENST00000641316 2276 ntBASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 AC105020.6-201ENST00000621523 1217 ntBASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.29■□□□□ 0.68
CLK4Q9HAZ1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 AL138781.1-201ENST00000566567 1274 ntBASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
CLK4Q9HAZ1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 KRT8P36-201ENST00000489121 1440 ntBASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms