Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 AC083906.2-201ENST00000511578 360 ntBASIC19.02■□□□□ 0.64
BRF2Q9HAW0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 TREX1-205ENST00000625293 1783 ntBASIC19.01■□□□□ 0.63
BRF2Q9HAW0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 MIPEPP3-201ENST00000412105 444 ntBASIC19.01■□□□□ 0.63
BRF2Q9HAW0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 AL158211.5-201ENST00000623583 2518 ntBASIC19.01■□□□□ 0.63
BRF2Q9HAW0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 AC073210.2-201ENST00000430369 194 ntBASIC19■□□□□ 0.63
BRF2Q9HAW0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 AC092118.2-201ENST00000613495 667 ntBASIC19■□□□□ 0.63
BRF2Q9HAW0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.99■□□□□ 0.63
BRF2Q9HAW0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms