Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 AC083906.2-201ENST00000511578 360 ntBASIC19.02■□□□□ 0.64
BRF2Q9HAW0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF2Q9HAW0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BRF2Q9HAW0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 TREX1-205ENST00000625293 1783 ntBASIC19.01■□□□□ 0.63
BRF2Q9HAW0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 MIPEPP3-201ENST00000412105 444 ntBASIC19.01■□□□□ 0.63
BRF2Q9HAW0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 AL158211.5-201ENST00000623583 2518 ntBASIC19.01■□□□□ 0.63
BRF2Q9HAW0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF2Q9HAW0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 AC073210.2-201ENST00000430369 194 ntBASIC19■□□□□ 0.63
BRF2Q9HAW0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 AC092118.2-201ENST00000613495 667 ntBASIC19■□□□□ 0.63
BRF2Q9HAW0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF2Q9HAW0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
BRF2Q9HAW0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF2Q9HAW0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.99■□□□□ 0.63
BRF2Q9HAW0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms