Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 MYC-209ENST00000641252 345 ntBASIC18.39■□□□□ 0.53
TM9SF2Q99805 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 FP700111.2-201ENST00000619190 1892 ntBASIC18.38■□□□□ 0.53
TM9SF2Q99805 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 AIRN-201ENST00000601203 4374 ntBASIC18.38■□□□□ 0.53
TM9SF2Q99805 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF2Q99805 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
TM9SF2Q99805 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 AC083880.1-201ENST00000608266 535 ntBASIC18.37■□□□□ 0.53
TM9SF2Q99805 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF2Q99805 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TM9SF2Q99805 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 KRT18P68-201ENST00000392293 1000 ntBASIC18.36■□□□□ 0.53
TM9SF2Q99805 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 AL355472.2-201ENST00000422958 438 ntBASIC18.36■□□□□ 0.53
TM9SF2Q99805 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF2Q99805 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.36■□□□□ 0.53
TM9SF2Q99805 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms