Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NPAS1Q99742 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
NPAS1Q99742 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.11■□□□□ 0.49
NPAS1Q99742 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.11■□□□□ 0.49
NPAS1Q99742 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 KRT8P20-201ENST00000423953 1409 ntBASIC18.11■□□□□ 0.49
NPAS1Q99742 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS1Q99742 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS1Q99742 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS1Q99742 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS1Q99742 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS1Q99742 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS1Q99742 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS1Q99742 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NPAS1Q99742 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NPAS1Q99742 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS1Q99742 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS1Q99742 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS1Q99742 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS1Q99742 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS1Q99742 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
NPAS1Q99742 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
NPAS1Q99742 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS1Q99742 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
NPAS1Q99742 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NPAS1Q99742 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NPAS1Q99742 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.09■□□□□ 0.49
NPAS1Q99742 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.09■□□□□ 0.49
NPAS1Q99742 TSPY20P-201ENST00000450910 630 ntBASIC18.09■□□□□ 0.49
NPAS1Q99742 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.09■□□□□ 0.49
NPAS1Q99742 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.09■□□□□ 0.49
NPAS1Q99742 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS1Q99742 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.09■□□□□ 0.49
NPAS1Q99742 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS1Q99742 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
NPAS1Q99742 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS1Q99742 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS1Q99742 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.08■□□□□ 0.49
NPAS1Q99742 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.08■□□□□ 0.49
NPAS1Q99742 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.08■□□□□ 0.48
NPAS1Q99742 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.08■□□□□ 0.48
NPAS1Q99742 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 UNC93B4-201ENST00000505679 747 ntBASIC18.08■□□□□ 0.48
NPAS1Q99742 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.08■□□□□ 0.48
NPAS1Q99742 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms