Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 SLC25A24-204ENST00000569674 2357 ntBASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 KRT16P5-201ENST00000455284 522 ntBASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 AP001412.1-201ENST00000608405 714 ntBASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDK5RAP1Q96SZ6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 RARRES2P10-201ENST00000564312 460 ntBASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 AC073314.1-201ENST00000568729 2216 ntBASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.65■□□□□ 0.9
CDK5RAP1Q96SZ6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK5RAP1Q96SZ6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK5RAP1Q96SZ6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.64■□□□□ 0.9
CDK5RAP1Q96SZ6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 AC012618.2-201ENST00000428058 849 ntBASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK5RAP1Q96SZ6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 AP006587.1-201ENST00000534129 1502 ntBASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 AC018553.1-201ENST00000616682 1458 ntBASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 TFP1-202ENST00000475455 1573 ntBASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDK5RAP1Q96SZ6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 AL353807.1-201ENST00000427475 662 ntBASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CDK5RAP1Q96SZ6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK5RAP1Q96SZ6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms