Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPRD1AQ96P16 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 AC098590.1-201ENST00000468126 897 ntBASIC20.49■□□□□ 0.87
RPRD1AQ96P16 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 C1QBPP2-201ENST00000528754 825 ntBASIC20.49■□□□□ 0.87
RPRD1AQ96P16 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 MTDHP1-201ENST00000605323 784 ntBASIC20.49■□□□□ 0.87
RPRD1AQ96P16 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPRD1AQ96P16 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 AL121829.2-201ENST00000620908 328 ntBASIC20.48■□□□□ 0.87
RPRD1AQ96P16 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPRD1AQ96P16 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 AL158047.1-201ENST00000445918 881 ntBASIC20.47■□□□□ 0.87
RPRD1AQ96P16 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 PRKY-204ENST00000533551 1019 ntBASIC20.47■□□□□ 0.87
RPRD1AQ96P16 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 AC142381.4-202ENST00000563973 229 ntBASIC20.47■□□□□ 0.87
RPRD1AQ96P16 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 AL023875.1-201ENST00000640777 796 ntBASIC20.47■□□□□ 0.87
RPRD1AQ96P16 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPRD1AQ96P16 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 GCSHP5-201ENST00000443090 522 ntBASIC20.46■□□□□ 0.87
RPRD1AQ96P16 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 LINC01521-201ENST00000504184 1943 ntBASIC20.46■□□□□ 0.87
RPRD1AQ96P16 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.46■□□□□ 0.87
RPRD1AQ96P16 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RPRD1AQ96P16 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms