Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 AL117328.2-201ENST00000624617 1940 ntBASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 AC121338.2-201ENST00000622535 1744 ntBASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 MESTP1-201ENST00000404287 994 ntBASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRNP40Q96DI7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ECEL1P1-201ENST00000373592 1742 ntBASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ECEL1P2-202ENST00000465689 757 ntBASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 AC006011.2-201ENST00000621313 1158 ntBASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRNP40Q96DI7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 EGLN1P1-201ENST00000531623 762 ntBASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 C1QL1P1-201ENST00000568105 661 ntBASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 AL445675.2-201ENST00000620291 557 ntBASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 CLDN5-201ENST00000403084 2357 ntBASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 AP006587.1-201ENST00000534129 1502 ntBASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRNP40Q96DI7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 AC026271.3-201ENST00000571884 352 ntBASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 AP005242.2-201ENST00000580065 1175 ntBASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNRNP40Q96DI7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms