Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CASKIN1Q8WXD9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.57
CASKIN1Q8WXD9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CASKIN1Q8WXD9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.57
CASKIN1Q8WXD9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CASKIN1Q8WXD9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CASKIN1Q8WXD9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC31.07■■■□□ 2.57
CASKIN1Q8WXD9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.07■■■□□ 2.56
CASKIN1Q8WXD9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 GOLGA6L3-201ENST00000507199 1679 ntBASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 MIR1238-201ENST00000408483 83 ntBASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 AC004980.1-204ENST00000429707 299 ntBASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 AC010947.1-201ENST00000623454 693 ntBASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CASKIN1Q8WXD9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 CYP2D8P-201ENST00000433633 1490 ntBASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 BX119927.1-201ENST00000636596 1552 ntBASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CASKIN1Q8WXD9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 B3GAT3P1-201ENST00000471720 806 ntBASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 AL031985.4-201ENST00000642138 673 ntBASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
CASKIN1Q8WXD9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 DGCR10-201ENST00000609839 495 ntBASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CASKIN1Q8WXD9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms