Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC023632.3-201ENST00000521633 145 ntBASIC23.63■■□□□ 1.37
NKX2-3Q8TAU0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.63■■□□□ 1.37
NKX2-3Q8TAU0 AL445228.2-201ENST00000605589 952 ntBASIC23.63■■□□□ 1.37
NKX2-3Q8TAU0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NKX2-3Q8TAU0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
NKX2-3Q8TAU0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 KRT8P17-201ENST00000453110 1448 ntBASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 RCN1P1-201ENST00000400413 996 ntBASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 AC087499.1-201ENST00000418141 1075 ntBASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 TSPY7P-201ENST00000431358 1114 ntBASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
NKX2-3Q8TAU0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 AL691432.2-201ENST00000607222 2038 ntBASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 MIR4785-201ENST00000585005 73 ntBASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 LINC01521-201ENST00000504184 1943 ntBASIC23.61■■□□□ 1.37
NKX2-3Q8TAU0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 AL031963.3-201ENST00000606441 850 ntBASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 BX119927.1-201ENST00000636596 1552 ntBASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NKX2-3Q8TAU0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.59■■□□□ 1.37
NKX2-3Q8TAU0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NKX2-3Q8TAU0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.58■■□□□ 1.37
NKX2-3Q8TAU0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
NKX2-3Q8TAU0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NKX2-3Q8TAU0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NKX2-3Q8TAU0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms