Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUP43Q8NFH3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.61■□□□□ 0.57
NUP43Q8NFH3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.61■□□□□ 0.57
NUP43Q8NFH3 GUSBP6-202ENST00000438529 1198 ntBASIC18.61■□□□□ 0.57
NUP43Q8NFH3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NUP43Q8NFH3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 TSPY6P-201ENST00000448518 926 ntBASIC18.6■□□□□ 0.57
NUP43Q8NFH3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.6■□□□□ 0.57
NUP43Q8NFH3 AC125437.2-201ENST00000625180 2167 ntBASIC18.59■□□□□ 0.57
NUP43Q8NFH3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 AC092118.2-201ENST00000613495 667 ntBASIC18.59■□□□□ 0.57
NUP43Q8NFH3 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.59■□□□□ 0.57
NUP43Q8NFH3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.59■□□□□ 0.57
NUP43Q8NFH3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUP43Q8NFH3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NUP43Q8NFH3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NUP43Q8NFH3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NUP43Q8NFH3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
NUP43Q8NFH3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
NUP43Q8NFH3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms