Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PNMA1Q8ND90 PHGDH-210ENST00000641115 1638 ntBASIC23.18■■□□□ 1.3
PNMA1Q8ND90 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PNMA1Q8ND90 AC116351.2-201ENST00000606540 1585 ntBASIC23.18■■□□□ 1.3
PNMA1Q8ND90 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PNMA1Q8ND90 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PNMA1Q8ND90 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PNMA1Q8ND90 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 AC066615.1-201ENST00000640911 628 ntBASIC23.17■■□□□ 1.3
PNMA1Q8ND90 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
PNMA1Q8ND90 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 AC018553.1-201ENST00000616682 1458 ntBASIC23.16■■□□□ 1.3
PNMA1Q8ND90 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 AC099778.1-201ENST00000568593 1911 ntBASIC23.16■■□□□ 1.3
PNMA1Q8ND90 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PNMA1Q8ND90 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PNMA1Q8ND90 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.14■■□□□ 1.3
PNMA1Q8ND90 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
PNMA1Q8ND90 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
PNMA1Q8ND90 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
PNMA1Q8ND90 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PNMA1Q8ND90 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 UBE2SP1-201ENST00000450587 669 ntBASIC23.14■■□□□ 1.29
PNMA1Q8ND90 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 AC110285.5-201ENST00000611501 352 ntBASIC23.14■■□□□ 1.29
PNMA1Q8ND90 AL691432.2-201ENST00000607222 2038 ntBASIC23.14■■□□□ 1.29
PNMA1Q8ND90 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PNMA1Q8ND90 LINC01521-201ENST00000504184 1943 ntBASIC23.14■■□□□ 1.29
PNMA1Q8ND90 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PNMA1Q8ND90 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms