Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 MFSD11-216ENST00000590393 1141 ntBASIC20.59■□□□□ 0.89
CCDC89Q8N998 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 AC005332.7-201ENST00000614046 2005 ntBASIC20.59■□□□□ 0.89
CCDC89Q8N998 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC89Q8N998 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC89Q8N998 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC89Q8N998 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC89Q8N998 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC89Q8N998 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC89Q8N998 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC89Q8N998 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC89Q8N998 RNF165-205ENST00000588679 2904 ntBASIC20.58■□□□□ 0.88
CCDC89Q8N998 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC89Q8N998 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC89Q8N998 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC89Q8N998 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC89Q8N998 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CCDC89Q8N998 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC89Q8N998 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC89Q8N998 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 MCRIP2P1-201ENST00000394346 511 ntBASIC20.57■□□□□ 0.88
CCDC89Q8N998 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC89Q8N998 RARRES2P4-201ENST00000514074 484 ntBASIC20.57■□□□□ 0.88
CCDC89Q8N998 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC89Q8N998 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC89Q8N998 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC89Q8N998 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.57■□□□□ 0.88
CCDC89Q8N998 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC89Q8N998 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC89Q8N998 AC093484.2-201ENST00000580996 2166 ntBASIC20.56■□□□□ 0.88
CCDC89Q8N998 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC89Q8N998 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC89Q8N998 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC89Q8N998 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC89Q8N998 KRT18P5-201ENST00000436075 1291 ntBASIC20.56■□□□□ 0.88
CCDC89Q8N998 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC89Q8N998 AC100791.3-201ENST00000617619 330 ntBASIC20.56■□□□□ 0.88
CCDC89Q8N998 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC89Q8N998 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC89Q8N998 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC89Q8N998 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC89Q8N998 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 AC009237.14-201ENST00000609975 1594 ntBASIC20.55■□□□□ 0.88
CCDC89Q8N998 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms