Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC170Q8IYT3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC170Q8IYT3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 KRT18P61-201ENST00000585825 1298 ntBASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 AC010536.3-201ENST00000620306 533 ntBASIC21.33■■□□□ 1.01
CCDC170Q8IYT3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC170Q8IYT3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC170Q8IYT3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCDC170Q8IYT3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC170Q8IYT3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC170Q8IYT3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CCDC170Q8IYT3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.32■■□□□ 1
CCDC170Q8IYT3 KRT8P20-201ENST00000423953 1409 ntBASIC21.32■■□□□ 1
CCDC170Q8IYT3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.32■■□□□ 1
CCDC170Q8IYT3 AL032819.2-201ENST00000624543 2162 ntBASIC21.32■■□□□ 1
CCDC170Q8IYT3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.32■■□□□ 1
CCDC170Q8IYT3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.32■■□□□ 1
CCDC170Q8IYT3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CCDC170Q8IYT3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.32■■□□□ 1
CCDC170Q8IYT3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC170Q8IYT3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 AC007322.4-201ENST00000509611 723 ntBASIC21.31■■□□□ 1
CCDC170Q8IYT3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.31■■□□□ 1
CCDC170Q8IYT3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC170Q8IYT3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms