Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE9Q8IYJ1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 NCF1B-203ENST00000435988 1254 ntBASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CPNE9Q8IYJ1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 GPX1P1-201ENST00000388829 606 ntBASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 TSPY6P-201ENST00000448518 926 ntBASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE9Q8IYJ1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE9Q8IYJ1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE9Q8IYJ1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE9Q8IYJ1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE9Q8IYJ1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 HLA-G-202ENST00000376815 851 ntBASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 HLA-G-203ENST00000376818 1127 ntBASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 SLC29A4P1-201ENST00000398760 971 ntBASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CPNE9Q8IYJ1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 AC125437.2-201ENST00000625180 2167 ntBASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 KRT16P6-202ENST00000425692 1426 ntBASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 DUSP5P2-201ENST00000426873 1033 ntBASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE9Q8IYJ1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms