Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MIR935-201ENST00000401179 91 ntBASIC24.66■■□□□ 1.54
SMC5Q8IY18 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.66■■□□□ 1.54
SMC5Q8IY18 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMC5Q8IY18 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.65■■□□□ 1.54
SMC5Q8IY18 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC24.65■■□□□ 1.54
SMC5Q8IY18 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
SMC5Q8IY18 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SMC5Q8IY18 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SMC5Q8IY18 BX276092.2-201ENST00000417668 665 ntBASIC24.65■■□□□ 1.54
SMC5Q8IY18 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.65■■□□□ 1.54
SMC5Q8IY18 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.65■■□□□ 1.54
SMC5Q8IY18 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SMC5Q8IY18 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMC5Q8IY18 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMC5Q8IY18 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SMC5Q8IY18 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMC5Q8IY18 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.64■■□□□ 1.54
SMC5Q8IY18 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMC5Q8IY18 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.64■■□□□ 1.54
SMC5Q8IY18 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMC5Q8IY18 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.64■■□□□ 1.54
SMC5Q8IY18 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
SMC5Q8IY18 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
SMC5Q8IY18 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMC5Q8IY18 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMC5Q8IY18 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
SMC5Q8IY18 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.63■■□□□ 1.53
SMC5Q8IY18 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
SMC5Q8IY18 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
SMC5Q8IY18 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.63■■□□□ 1.53
SMC5Q8IY18 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMC5Q8IY18 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMC5Q8IY18 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SMC5Q8IY18 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SMC5Q8IY18 GUSBP6-202ENST00000438529 1198 ntBASIC24.62■■□□□ 1.53
SMC5Q8IY18 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMC5Q8IY18 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SMC5Q8IY18 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMC5Q8IY18 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SMC5Q8IY18 MIPEPP3-201ENST00000412105 444 ntBASIC24.61■■□□□ 1.53
SMC5Q8IY18 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMC5Q8IY18 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMC5Q8IY18 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.61■■□□□ 1.53
SMC5Q8IY18 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMC5Q8IY18 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMC5Q8IY18 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMC5Q8IY18 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMC5Q8IY18 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMC5Q8IY18 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMC5Q8IY18 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.6■■□□□ 1.53
SMC5Q8IY18 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 RNF165-205ENST00000588679 2904 ntBASIC24.59■■□□□ 1.53
SMC5Q8IY18 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SMC5Q8IY18 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 AC083906.2-201ENST00000511578 360 ntBASIC24.59■■□□□ 1.53
SMC5Q8IY18 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms