Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC007663.1-201ENST00000438948 1240 ntBASIC25.14■■□□□ 1.62
COL23A1Q86Y22 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.14■■□□□ 1.62
COL23A1Q86Y22 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL23A1Q86Y22 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
COL23A1Q86Y22 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL23A1Q86Y22 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL23A1Q86Y22 RCC2P6-201ENST00000526625 1557 ntBASIC25.13■■□□□ 1.61
COL23A1Q86Y22 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 AC116407.4-201ENST00000623319 1061 ntBASIC25.12■■□□□ 1.61
COL23A1Q86Y22 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL23A1Q86Y22 AC005332.1-201ENST00000577698 1310 ntBASIC25.12■■□□□ 1.61
COL23A1Q86Y22 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 MFAP1P1-201ENST00000442257 1255 ntBASIC25.11■■□□□ 1.61
COL23A1Q86Y22 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 AC011298.2-201ENST00000617989 482 ntBASIC25.11■■□□□ 1.61
COL23A1Q86Y22 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC25.11■■□□□ 1.61
COL23A1Q86Y22 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 CCR12P-201ENST00000446203 998 ntBASIC25.1■■□□□ 1.61
COL23A1Q86Y22 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.1■■□□□ 1.61
COL23A1Q86Y22 AC010653.2-201ENST00000623505 997 ntBASIC25.1■■□□□ 1.61
COL23A1Q86Y22 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL23A1Q86Y22 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL23A1Q86Y22 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 AC096733.2-201ENST00000609937 1394 ntBASIC25.08■■□□□ 1.61
COL23A1Q86Y22 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 SLC25A1P2-201ENST00000430693 912 ntBASIC25.08■■□□□ 1.61
COL23A1Q86Y22 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 AL671277.2-201ENST00000458060 996 ntBASIC25.08■■□□□ 1.61
COL23A1Q86Y22 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 AC092338.2-201ENST00000568827 1415 ntBASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms