Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.39■□□□□ 0.53
VRK2Q86Y07 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VRK2Q86Y07 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK2Q86Y07 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 AL050303.2-201ENST00000619798 666 ntBASIC18.39■□□□□ 0.53
VRK2Q86Y07 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK2Q86Y07 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK2Q86Y07 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK2Q86Y07 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
VRK2Q86Y07 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 AL137784.2-201ENST00000607332 1000 ntBASIC18.38■□□□□ 0.53
VRK2Q86Y07 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VRK2Q86Y07 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VRK2Q86Y07 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 AC133552.2-202ENST00000575694 574 ntBASIC18.37■□□□□ 0.53
VRK2Q86Y07 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.37■□□□□ 0.53
VRK2Q86Y07 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK2Q86Y07 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.36■□□□□ 0.53
VRK2Q86Y07 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
VRK2Q86Y07 LSM12P1-201ENST00000411836 588 ntBASIC18.36■□□□□ 0.53
VRK2Q86Y07 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.36■□□□□ 0.53
VRK2Q86Y07 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
VRK2Q86Y07 AC105036.2-201ENST00000569468 176 ntBASIC18.36■□□□□ 0.53
VRK2Q86Y07 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.36■□□□□ 0.53
VRK2Q86Y07 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 TREX1-205ENST00000625293 1783 ntBASIC18.36■□□□□ 0.53
VRK2Q86Y07 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VRK2Q86Y07 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 AC009237.14-201ENST00000609975 1594 ntBASIC18.35■□□□□ 0.53
VRK2Q86Y07 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 HLA-G-202ENST00000376815 851 ntBASIC18.35■□□□□ 0.53
VRK2Q86Y07 HLA-G-203ENST00000376818 1127 ntBASIC18.35■□□□□ 0.53
VRK2Q86Y07 MIR663A-201ENST00000385250 93 ntBASIC18.35■□□□□ 0.53
VRK2Q86Y07 AC026185.1-201ENST00000445748 174 ntBASIC18.35■□□□□ 0.53
VRK2Q86Y07 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms