Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB1Q86U70 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.85■□□□□ 0.77
LDB1Q86U70 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LDB1Q86U70 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB1Q86U70 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.85■□□□□ 0.77
LDB1Q86U70 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.85■□□□□ 0.77
LDB1Q86U70 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LDB1Q86U70 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB1Q86U70 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.85■□□□□ 0.77
LDB1Q86U70 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
LDB1Q86U70 AL109923.1-201ENST00000618799 583 ntBASIC19.85■□□□□ 0.77
LDB1Q86U70 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.85■□□□□ 0.77
LDB1Q86U70 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB1Q86U70 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LDB1Q86U70 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB1Q86U70 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDB1Q86U70 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.84■□□□□ 0.77
LDB1Q86U70 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LDB1Q86U70 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.84■□□□□ 0.77
LDB1Q86U70 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.84■□□□□ 0.77
LDB1Q86U70 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.84■□□□□ 0.77
LDB1Q86U70 AC092118.2-201ENST00000613495 667 ntBASIC19.84■□□□□ 0.77
LDB1Q86U70 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LDB1Q86U70 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDB1Q86U70 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
LDB1Q86U70 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LDB1Q86U70 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.83■□□□□ 0.77
LDB1Q86U70 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.83■□□□□ 0.77
LDB1Q86U70 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.83■□□□□ 0.77
LDB1Q86U70 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LDB1Q86U70 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.83■□□□□ 0.77
LDB1Q86U70 AC091874.3-201ENST00000512672 1195 ntBASIC19.83■□□□□ 0.77
LDB1Q86U70 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDB1Q86U70 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.83■□□□□ 0.77
LDB1Q86U70 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.83■□□□□ 0.77
LDB1Q86U70 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDB1Q86U70 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDB1Q86U70 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.83■□□□□ 0.76
LDB1Q86U70 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.83■□□□□ 0.76
LDB1Q86U70 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDB1Q86U70 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LDB1Q86U70 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDB1Q86U70 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.83■□□□□ 0.76
LDB1Q86U70 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LDB1Q86U70 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.83■□□□□ 0.76
LDB1Q86U70 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDB1Q86U70 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LDB1Q86U70 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.82■□□□□ 0.76
LDB1Q86U70 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.82■□□□□ 0.76
LDB1Q86U70 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.82■□□□□ 0.76
LDB1Q86U70 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.82■□□□□ 0.76
LDB1Q86U70 HLA-G-202ENST00000376815 851 ntBASIC19.82■□□□□ 0.76
LDB1Q86U70 HLA-G-203ENST00000376818 1127 ntBASIC19.82■□□□□ 0.76
LDB1Q86U70 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LDB1Q86U70 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.82■□□□□ 0.76
LDB1Q86U70 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 AC104771.1-201ENST00000603335 964 ntBASIC19.82■□□□□ 0.76
LDB1Q86U70 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.82■□□□□ 0.76
LDB1Q86U70 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LDB1Q86U70 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LDB1Q86U70 KRT16P6-202ENST00000425692 1426 ntBASIC19.82■□□□□ 0.76
LDB1Q86U70 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LDB1Q86U70 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LDB1Q86U70 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
LDB1Q86U70 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.82■□□□□ 0.76
LDB1Q86U70 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDB1Q86U70 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
LDB1Q86U70 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LDB1Q86U70 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.81■□□□□ 0.76
LDB1Q86U70 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.81■□□□□ 0.76
LDB1Q86U70 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms