Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 AC092666.2-201ENST00000613287 246 ntBASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.73■□□□□ 0.75
ZNF549Q6P9A3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 KRT16P6-202ENST00000425692 1426 ntBASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF549Q6P9A3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 HLA-G-202ENST00000376815 851 ntBASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 HLA-G-203ENST00000376818 1127 ntBASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 TSPY6P-201ENST00000448518 926 ntBASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF549Q6P9A3 AC009237.14-201ENST00000609975 1594 ntBASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms