Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 AC105036.2-201ENST00000569468 176 ntBASIC20.67■□□□□ 0.9
LRRC38Q5VT99 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 AL137784.2-201ENST00000607332 1000 ntBASIC20.67■□□□□ 0.9
LRRC38Q5VT99 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC38Q5VT99 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC38Q5VT99 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRC38Q5VT99 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.64■□□□□ 0.9
LRRC38Q5VT99 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC38Q5VT99 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC38Q5VT99 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC38Q5VT99 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC38Q5VT99 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC38Q5VT99 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC38Q5VT99 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.64■□□□□ 0.89
LRRC38Q5VT99 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC38Q5VT99 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 MIR663A-201ENST00000385250 93 ntBASIC20.63■□□□□ 0.89
LRRC38Q5VT99 BX276092.2-201ENST00000417668 665 ntBASIC20.63■□□□□ 0.89
LRRC38Q5VT99 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 CROCCP5-201ENST00000436658 830 ntBASIC20.63■□□□□ 0.89
LRRC38Q5VT99 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC38Q5VT99 AC005332.7-201ENST00000614046 2005 ntBASIC20.63■□□□□ 0.89
LRRC38Q5VT99 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC38Q5VT99 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC38Q5VT99 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC38Q5VT99 AC093484.2-201ENST00000580996 2166 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms