Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 AC004408.2-201ENST00000623613 2777 ntBASIC17.21■□□□□ 0.35
ATPAF1Q5TC12 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.21■□□□□ 0.34
ATPAF1Q5TC12 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 AC092720.2-201ENST00000602388 1665 ntBASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.2■□□□□ 0.34
ATPAF1Q5TC12 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 AIRN-201ENST00000601203 4374 ntBASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 RARRES2P4-201ENST00000514074 484 ntBASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
ATPAF1Q5TC12 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AC133552.2-202ENST00000575694 574 ntBASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AC069236.1-201ENST00000604339 616 ntBASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AC005181.1-201ENST00000604782 1256 ntBASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AC100791.3-201ENST00000617619 330 ntBASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 OR10C1-204ENST00000622521 1039 ntBASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms