Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIF1Q5T3J3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIF1Q5T3J3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRIF1Q5T3J3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 AC034268.1-201ENST00000441047 882 ntBASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
LRIF1Q5T3J3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 KRT18P68-201ENST00000392293 1000 ntBASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 CNN2P6-201ENST00000439038 900 ntBASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 MFSD11-216ENST00000590393 1141 ntBASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 AC068338.2-201ENST00000563278 1430 ntBASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.71■□□□□ 0.59
LRIF1Q5T3J3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms