Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 ECEL1P2-202ENST00000465689 757 ntBASIC19.45■□□□□ 0.7
CACNA1EQ15878 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 DUSP5P1-201ENST00000441325 1139 ntBASIC19.45■□□□□ 0.7
CACNA1EQ15878 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 AC097488.1-201ENST00000507834 756 ntBASIC19.45■□□□□ 0.7
CACNA1EQ15878 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CACNA1EQ15878 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.44■□□□□ 0.7
CACNA1EQ15878 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.44■□□□□ 0.7
CACNA1EQ15878 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.44■□□□□ 0.7
CACNA1EQ15878 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CACNA1EQ15878 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.44■□□□□ 0.7
CACNA1EQ15878 AC091076.1-201ENST00000610741 619 ntBASIC19.44■□□□□ 0.7
CACNA1EQ15878 AC006011.2-201ENST00000621313 1158 ntBASIC19.44■□□□□ 0.7
CACNA1EQ15878 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.44■□□□□ 0.7
CACNA1EQ15878 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
CACNA1EQ15878 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 AC005229.4-201ENST00000610085 2198 ntBASIC19.44■□□□□ 0.7
CACNA1EQ15878 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1EQ15878 TSPY14P-201ENST00000303979 915 ntBASIC19.43■□□□□ 0.7
CACNA1EQ15878 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 CRYGFP-201ENST00000418459 633 ntBASIC19.43■□□□□ 0.7
CACNA1EQ15878 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CACNA1EQ15878 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 KRT8P17-201ENST00000453110 1448 ntBASIC19.43■□□□□ 0.7
CACNA1EQ15878 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1EQ15878 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 AC063952.2-201ENST00000498792 1227 ntBASIC19.42■□□□□ 0.7
CACNA1EQ15878 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1EQ15878 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 AP006587.1-201ENST00000534129 1502 ntBASIC19.42■□□□□ 0.7
CACNA1EQ15878 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1EQ15878 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1EQ15878 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms