Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL1Q00532 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL1Q00532 AC105036.2-201ENST00000569468 176 ntBASIC19.55■□□□□ 0.72
CDKL1Q00532 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL1Q00532 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL1Q00532 AL031963.3-201ENST00000606441 850 ntBASIC19.55■□□□□ 0.72
CDKL1Q00532 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL1Q00532 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL1Q00532 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.55■□□□□ 0.72
CDKL1Q00532 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL1Q00532 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL1Q00532 MKRN4P-201ENST00000444706 1521 ntBASIC19.55■□□□□ 0.72
CDKL1Q00532 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL1Q00532 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL1Q00532 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL1Q00532 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL1Q00532 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL1Q00532 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDKL1Q00532 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL1Q00532 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL1Q00532 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL1Q00532 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL1Q00532 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL1Q00532 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.54■□□□□ 0.72
CDKL1Q00532 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CDKL1Q00532 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL1Q00532 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL1Q00532 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL1Q00532 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL1Q00532 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CDKL1Q00532 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL1Q00532 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDKL1Q00532 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDKL1Q00532 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.53■□□□□ 0.72
CDKL1Q00532 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL1Q00532 LSM12P1-201ENST00000411836 588 ntBASIC19.53■□□□□ 0.72
CDKL1Q00532 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL1Q00532 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL1Q00532 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDKL1Q00532 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL1Q00532 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 BX323043.1-201ENST00000641006 1765 ntBASIC19.52■□□□□ 0.72
CDKL1Q00532 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 KRT8P20-201ENST00000423953 1409 ntBASIC19.52■□□□□ 0.72
CDKL1Q00532 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL1Q00532 AC116562.4-201ENST00000641316 2276 ntBASIC19.52■□□□□ 0.72
CDKL1Q00532 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.52■□□□□ 0.72
CDKL1Q00532 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL1Q00532 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.52■□□□□ 0.72
CDKL1Q00532 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.52■□□□□ 0.72
CDKL1Q00532 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.52■□□□□ 0.72
CDKL1Q00532 AC023632.3-201ENST00000521633 145 ntBASIC19.52■□□□□ 0.72
CDKL1Q00532 AL121832.2-201ENST00000610979 668 ntBASIC19.52■□□□□ 0.72
CDKL1Q00532 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CDKL1Q00532 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL1Q00532 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CDKL1Q00532 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL1Q00532 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.52■□□□□ 0.71
CDKL1Q00532 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL1Q00532 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.52■□□□□ 0.71
CDKL1Q00532 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL1Q00532 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.52■□□□□ 0.71
CDKL1Q00532 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKL1Q00532 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CDKL1Q00532 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKL1Q00532 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDKL1Q00532 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.51■□□□□ 0.71
CDKL1Q00532 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.51■□□□□ 0.71
CDKL1Q00532 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL1Q00532 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKL1Q00532 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL1Q00532 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKL1Q00532 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDKL1Q00532 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL1Q00532 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms