Protein–RNA interactions for Protein: P98173

FAM3A, Protein FAM3A, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3AP98173 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FAM3AP98173 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.23■□□□□ 0.35
FAM3AP98173 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.22■□□□□ 0.35
FAM3AP98173 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.22■□□□□ 0.35
FAM3AP98173 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
FAM3AP98173 TMEM179-206ENST00000616017 1645 ntBASIC17.22■□□□□ 0.35
FAM3AP98173 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FAM3AP98173 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 BX276092.2-201ENST00000417668 665 ntBASIC17.22■□□□□ 0.35
FAM3AP98173 AC006970.2-201ENST00000450065 779 ntBASIC17.22■□□□□ 0.35
FAM3AP98173 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM3AP98173 AL121832.2-201ENST00000610979 668 ntBASIC17.22■□□□□ 0.35
FAM3AP98173 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM3AP98173 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
FAM3AP98173 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FAM3AP98173 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM3AP98173 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM3AP98173 KRT16P6-202ENST00000425692 1426 ntBASIC17.21■□□□□ 0.35
FAM3AP98173 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM3AP98173 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.21■□□□□ 0.35
FAM3AP98173 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.21■□□□□ 0.35
FAM3AP98173 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
FAM3AP98173 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM3AP98173 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM3AP98173 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
FAM3AP98173 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FAM3AP98173 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.21■□□□□ 0.35
FAM3AP98173 HLA-G-202ENST00000376815 851 ntBASIC17.21■□□□□ 0.35
FAM3AP98173 HLA-G-203ENST00000376818 1127 ntBASIC17.21■□□□□ 0.35
FAM3AP98173 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.21■□□□□ 0.35
FAM3AP98173 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.21■□□□□ 0.35
FAM3AP98173 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM3AP98173 AC083906.2-201ENST00000511578 360 ntBASIC17.21■□□□□ 0.35
FAM3AP98173 AC023632.3-201ENST00000521633 145 ntBASIC17.21■□□□□ 0.35
FAM3AP98173 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.21■□□□□ 0.35
FAM3AP98173 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.21■□□□□ 0.35
FAM3AP98173 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.21■□□□□ 0.35
FAM3AP98173 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.21■□□□□ 0.35
FAM3AP98173 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FAM3AP98173 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FAM3AP98173 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FAM3AP98173 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.2■□□□□ 0.34
FAM3AP98173 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
FAM3AP98173 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.2■□□□□ 0.34
FAM3AP98173 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.2■□□□□ 0.34
FAM3AP98173 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
FAM3AP98173 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.2■□□□□ 0.34
FAM3AP98173 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.2■□□□□ 0.34
FAM3AP98173 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
FAM3AP98173 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FAM3AP98173 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FAM3AP98173 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 MIPEPP3-201ENST00000412105 444 ntBASIC17.19■□□□□ 0.34
FAM3AP98173 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 AC125437.2-201ENST00000625180 2167 ntBASIC17.19■□□□□ 0.34
FAM3AP98173 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FAM3AP98173 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FAM3AP98173 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FAM3AP98173 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.18■□□□□ 0.34
FAM3AP98173 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.18■□□□□ 0.34
FAM3AP98173 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FAM3AP98173 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.18■□□□□ 0.34
FAM3AP98173 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms