Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.51□□□□□ -0.09
PRKDCP78527 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PRKDCP78527 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.5□□□□□ -0.09
PRKDCP78527 RCC2P6-201ENST00000526625 1557 ntBASIC14.5□□□□□ -0.09
PRKDCP78527 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.5□□□□□ -0.09
PRKDCP78527 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.5□□□□□ -0.09
PRKDCP78527 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.5□□□□□ -0.09
PRKDCP78527 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.5□□□□□ -0.09
PRKDCP78527 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PRKDCP78527 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 AC116562.4-202ENST00000641738 218 ntBASIC14.5□□□□□ -0.09
PRKDCP78527 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.5□□□□□ -0.09
PRKDCP78527 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.5□□□□□ -0.09
PRKDCP78527 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.5□□□□□ -0.09
PRKDCP78527 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.5□□□□□ -0.09
PRKDCP78527 AL355385.1-201ENST00000606123 409 ntBASIC14.5□□□□□ -0.09
PRKDCP78527 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PRKDCP78527 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PRKDCP78527 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PRKDCP78527 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.5□□□□□ -0.09
PRKDCP78527 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.5□□□□□ -0.09
PRKDCP78527 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.5□□□□□ -0.09
PRKDCP78527 AL023973.1-201ENST00000624619 620 ntBASIC14.5□□□□□ -0.09
PRKDCP78527 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRKDCP78527 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PRKDCP78527 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
PRKDCP78527 AP002383.4-201ENST00000442518 975 ntBASIC14.49□□□□□ -0.09
PRKDCP78527 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.49□□□□□ -0.09
PRKDCP78527 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.49□□□□□ -0.09
PRKDCP78527 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.49□□□□□ -0.09
PRKDCP78527 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.49□□□□□ -0.09
PRKDCP78527 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.49□□□□□ -0.09
PRKDCP78527 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
PRKDCP78527 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PRKDCP78527 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PRKDCP78527 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRKDCP78527 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PRKDCP78527 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PRKDCP78527 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.48□□□□□ -0.09
PRKDCP78527 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PRKDCP78527 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PRKDCP78527 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.48□□□□□ -0.09
PRKDCP78527 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.48□□□□□ -0.09
PRKDCP78527 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.48□□□□□ -0.09
PRKDCP78527 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PRKDCP78527 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.48□□□□□ -0.09
PRKDCP78527 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.48□□□□□ -0.09
PRKDCP78527 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.48□□□□□ -0.09
PRKDCP78527 AC141257.4-201ENST00000634557 245 ntBASIC14.48□□□□□ -0.09
PRKDCP78527 AC136944.6-201ENST00000634818 245 ntBASIC14.48□□□□□ -0.09
PRKDCP78527 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PRKDCP78527 KRT18P1-202ENST00000452408 1331 ntBASIC14.48□□□□□ -0.09
PRKDCP78527 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRKDCP78527 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.47□□□□□ -0.09
PRKDCP78527 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.47□□□□□ -0.09
PRKDCP78527 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRKDCP78527 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRKDCP78527 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRKDCP78527 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PRKDCP78527 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PRKDCP78527 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRKDCP78527 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PRKDCP78527 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PRKDCP78527 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.47□□□□□ -0.09
PRKDCP78527 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms