Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
UBA52P62987 AC099778.1-201ENST00000568593 1911 ntBASIC17.08■□□□□ 0.33
UBA52P62987 AP004607.7-201ENST00000527152 1677 ntBASIC17.08■□□□□ 0.32
UBA52P62987 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.08■□□□□ 0.32
UBA52P62987 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.08■□□□□ 0.32
UBA52P62987 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 MIR4758-201ENST00000577688 71 ntBASIC17.08■□□□□ 0.32
UBA52P62987 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
UBA52P62987 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
UBA52P62987 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 AC005082.1-201ENST00000413042 2259 ntBASIC17.08■□□□□ 0.32
UBA52P62987 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.08■□□□□ 0.32
UBA52P62987 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBA52P62987 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
UBA52P62987 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
UBA52P62987 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.07■□□□□ 0.32
UBA52P62987 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.07■□□□□ 0.32
UBA52P62987 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.07■□□□□ 0.32
UBA52P62987 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
UBA52P62987 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.07■□□□□ 0.32
UBA52P62987 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBA52P62987 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.06■□□□□ 0.32
UBA52P62987 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.06■□□□□ 0.32
UBA52P62987 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.06■□□□□ 0.32
UBA52P62987 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBA52P62987 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.06■□□□□ 0.32
UBA52P62987 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
UBA52P62987 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.06■□□□□ 0.32
UBA52P62987 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.06■□□□□ 0.32
UBA52P62987 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
UBA52P62987 TERF1P5-201ENST00000477545 1207 ntBASIC17.06■□□□□ 0.32
UBA52P62987 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.06■□□□□ 0.32
UBA52P62987 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.06■□□□□ 0.32
UBA52P62987 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBA52P62987 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBA52P62987 AL512408.1-201ENST00000569378 2000 ntBASIC17.06■□□□□ 0.32
UBA52P62987 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.05■□□□□ 0.32
UBA52P62987 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBA52P62987 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
UBA52P62987 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
UBA52P62987 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.05■□□□□ 0.32
UBA52P62987 CYP2T1P-201ENST00000432607 1285 ntBASIC17.05■□□□□ 0.32
UBA52P62987 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 SLC7A5P1-201ENST00000568957 537 ntBASIC17.05■□□□□ 0.32
UBA52P62987 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.05■□□□□ 0.32
UBA52P62987 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBA52P62987 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBA52P62987 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
UBA52P62987 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBA52P62987 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
UBA52P62987 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA52P62987 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms