Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.12■□□□□ 0.49
CXCR4P61073 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.12■□□□□ 0.49
CXCR4P61073 AL358852.1-201ENST00000623174 1268 ntBASIC18.12■□□□□ 0.49
CXCR4P61073 AL049812.1-201ENST00000432563 2267 ntBASIC18.12■□□□□ 0.49
CXCR4P61073 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 KRT16P2-201ENST00000414673 1423 ntBASIC18.12■□□□□ 0.49
CXCR4P61073 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
CXCR4P61073 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CXCR4P61073 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CXCR4P61073 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.12■□□□□ 0.49
CXCR4P61073 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CXCR4P61073 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CXCR4P61073 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.11■□□□□ 0.49
CXCR4P61073 MIR6084-201ENST00000622012 110 ntBASIC18.11■□□□□ 0.49
CXCR4P61073 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CXCR4P61073 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.11■□□□□ 0.49
CXCR4P61073 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.11■□□□□ 0.49
CXCR4P61073 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CXCR4P61073 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXCR4P61073 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CXCR4P61073 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CXCR4P61073 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 AC120498.10-201ENST00000621827 505 ntBASIC18.1■□□□□ 0.49
CXCR4P61073 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CXCR4P61073 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CXCR4P61073 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXCR4P61073 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.09■□□□□ 0.49
CXCR4P61073 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.09■□□□□ 0.49
CXCR4P61073 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.09■□□□□ 0.49
CXCR4P61073 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.09■□□□□ 0.49
CXCR4P61073 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 AC138907.5-202ENST00000569484 235 ntBASIC18.09■□□□□ 0.49
CXCR4P61073 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CXCR4P61073 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CXCR4P61073 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CXCR4P61073 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CXCR4P61073 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CXCR4P61073 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.08■□□□□ 0.49
CXCR4P61073 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.08■□□□□ 0.49
CXCR4P61073 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CXCR4P61073 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CXCR4P61073 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CXCR4P61073 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.08■□□□□ 0.48
CXCR4P61073 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.08■□□□□ 0.48
CXCR4P61073 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.08■□□□□ 0.48
CXCR4P61073 SUDS3P1-201ENST00000505831 966 ntBASIC18.08■□□□□ 0.48
CXCR4P61073 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.08■□□□□ 0.48
CXCR4P61073 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
CXCR4P61073 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms