Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.28■■□□□ 1
VCPP55072 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCPP55072 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.28■■□□□ 1
VCPP55072 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
VCPP55072 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VCPP55072 AC116050.2-201ENST00000612102 1779 ntBASIC21.28■■□□□ 1
VCPP55072 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCPP55072 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCPP55072 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
VCPP55072 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
VCPP55072 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.27■■□□□ 1
VCPP55072 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.27■■□□□ 1
VCPP55072 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
VCPP55072 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.27■■□□□ 1
VCPP55072 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
VCPP55072 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.27■■□□□ 1
VCPP55072 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.27■■□□□ 1
VCPP55072 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.27■■□□□ 1
VCPP55072 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.27■■□□□ 1
VCPP55072 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
VCPP55072 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.27■■□□□ 1
VCPP55072 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 AL049597.2-201ENST00000565575 961 ntBASIC21.27■■□□□ 1
VCPP55072 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.27■■□□□ 1
VCPP55072 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCPP55072 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.27■□□□□ 0.99
VCPP55072 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VCPP55072 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
VCPP55072 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VCPP55072 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VCPP55072 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VCPP55072 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCPP55072 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VCPP55072 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VCPP55072 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.26■□□□□ 0.99
VCPP55072 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCPP55072 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VCPP55072 MCRIP2P1-201ENST00000394346 511 ntBASIC21.26■□□□□ 0.99
VCPP55072 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.26■□□□□ 0.99
VCPP55072 AC113410.3-201ENST00000623366 203 ntBASIC21.26■□□□□ 0.99
VCPP55072 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VCPP55072 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCPP55072 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCPP55072 CYP21A1P-202ENST00000354927 1481 ntBASIC21.26■□□□□ 0.99
VCPP55072 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.25■□□□□ 0.99
VCPP55072 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.25■□□□□ 0.99
VCPP55072 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.25■□□□□ 0.99
VCPP55072 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
VCPP55072 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VCPP55072 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.25■□□□□ 0.99
VCPP55072 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.25■□□□□ 0.99
VCPP55072 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
VCPP55072 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 AP001412.1-201ENST00000608405 714 ntBASIC21.25■□□□□ 0.99
VCPP55072 AL589743.5-201ENST00000616611 1050 ntBASIC21.25■□□□□ 0.99
VCPP55072 AL590326.2-201ENST00000625139 305 ntBASIC21.25■□□□□ 0.99
VCPP55072 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
VCPP55072 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.25■□□□□ 0.99
VCPP55072 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
VCPP55072 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCPP55072 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.24■□□□□ 0.99
VCPP55072 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VCPP55072 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.24■□□□□ 0.99
VCPP55072 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VCPP55072 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
VCPP55072 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.24■□□□□ 0.99
VCPP55072 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.24■□□□□ 0.99
VCPP55072 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
VCPP55072 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VCPP55072 AC100791.3-201ENST00000617619 330 ntBASIC21.24■□□□□ 0.99
VCPP55072 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms