Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATXN3P54252 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ATXN3P54252 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3P54252 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.24■□□□□ 0.83
ATXN3P54252 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ATXN3P54252 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATXN3P54252 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3P54252 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3P54252 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3P54252 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3P54252 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.23■□□□□ 0.83
ATXN3P54252 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.23■□□□□ 0.83
ATXN3P54252 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3P54252 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3P54252 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.23■□□□□ 0.83
ATXN3P54252 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ATXN3P54252 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.22■□□□□ 0.83
ATXN3P54252 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
ATXN3P54252 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
ATXN3P54252 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATXN3P54252 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 AFG3L1P-217ENST00000557444 2447 ntBASIC20.22■□□□□ 0.83
ATXN3P54252 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.22■□□□□ 0.83
ATXN3P54252 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.22■□□□□ 0.83
ATXN3P54252 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN3P54252 MTDHP1-201ENST00000605323 784 ntBASIC20.22■□□□□ 0.83
ATXN3P54252 AC124016.1-201ENST00000609552 612 ntBASIC20.22■□□□□ 0.83
ATXN3P54252 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.22■□□□□ 0.83
ATXN3P54252 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN3P54252 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.22■□□□□ 0.83
ATXN3P54252 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATXN3P54252 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ATXN3P54252 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3P54252 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATXN3P54252 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ATXN3P54252 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
ATXN3P54252 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3P54252 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATXN3P54252 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.21■□□□□ 0.83
ATXN3P54252 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ATXN3P54252 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.21■□□□□ 0.83
ATXN3P54252 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ATXN3P54252 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATXN3P54252 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.21■□□□□ 0.83
ATXN3P54252 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3P54252 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3P54252 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3P54252 C2orf69P4-201ENST00000565394 541 ntBASIC20.21■□□□□ 0.83
ATXN3P54252 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ATXN3P54252 AC110285.5-201ENST00000611501 352 ntBASIC20.21■□□□□ 0.83
ATXN3P54252 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.21■□□□□ 0.83
ATXN3P54252 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATXN3P54252 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATXN3P54252 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3P54252 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN3P54252 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ATXN3P54252 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms