Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
LIMK1P53667 AC027702.1-201ENST00000563810 1770 ntBASIC19.72■□□□□ 0.75
LIMK1P53667 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK1P53667 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.71■□□□□ 0.75
LIMK1P53667 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.71■□□□□ 0.75
LIMK1P53667 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.71■□□□□ 0.75
LIMK1P53667 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.71■□□□□ 0.75
LIMK1P53667 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.71■□□□□ 0.75
LIMK1P53667 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.71■□□□□ 0.75
LIMK1P53667 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
LIMK1P53667 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
LIMK1P53667 AL121906.2-201ENST00000621597 723 ntBASIC19.71■□□□□ 0.75
LIMK1P53667 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LIMK1P53667 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK1P53667 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK1P53667 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.7■□□□□ 0.74
LIMK1P53667 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK1P53667 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 AC022616.7-201ENST00000525383 220 ntBASIC19.7■□□□□ 0.74
LIMK1P53667 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK1P53667 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK1P53667 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK1P53667 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK1P53667 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
LIMK1P53667 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
LIMK1P53667 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LIMK1P53667 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.69■□□□□ 0.74
LIMK1P53667 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.69■□□□□ 0.74
LIMK1P53667 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.69■□□□□ 0.74
LIMK1P53667 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.69■□□□□ 0.74
LIMK1P53667 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.69■□□□□ 0.74
LIMK1P53667 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK1P53667 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.68■□□□□ 0.74
LIMK1P53667 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.68■□□□□ 0.74
LIMK1P53667 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.68■□□□□ 0.74
LIMK1P53667 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.68■□□□□ 0.74
LIMK1P53667 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 NIFKP9-201ENST00000419265 221 ntBASIC19.68■□□□□ 0.74
LIMK1P53667 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LIMK1P53667 BX664615.1-201ENST00000443558 458 ntBASIC19.68■□□□□ 0.74
LIMK1P53667 AC063952.2-201ENST00000498792 1227 ntBASIC19.68■□□□□ 0.74
LIMK1P53667 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.68■□□□□ 0.74
LIMK1P53667 AC023632.3-201ENST00000521633 145 ntBASIC19.68■□□□□ 0.74
LIMK1P53667 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 C2orf69P3-201ENST00000565542 1120 ntBASIC19.68■□□□□ 0.74
LIMK1P53667 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
LIMK1P53667 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.68■□□□□ 0.74
LIMK1P53667 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LIMK1P53667 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
LIMK1P53667 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK1P53667 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.67■□□□□ 0.74
LIMK1P53667 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.67■□□□□ 0.74
LIMK1P53667 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms