Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCNKAP51800 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CLCNKAP51800 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CLCNKAP51800 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLCNKAP51800 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLCNKAP51800 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 GABARAPL3-202ENST00000624044 1851 ntBASIC19.5■□□□□ 0.71
CLCNKAP51800 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCNKAP51800 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCNKAP51800 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCNKAP51800 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCNKAP51800 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCNKAP51800 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CLCNKAP51800 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCNKAP51800 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCNKAP51800 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.5■□□□□ 0.71
CLCNKAP51800 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCNKAP51800 AC110285.5-201ENST00000611501 352 ntBASIC19.5■□□□□ 0.71
CLCNKAP51800 FAM197Y4-202ENST00000622692 608 ntBASIC19.5■□□□□ 0.71
CLCNKAP51800 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCNKAP51800 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCNKAP51800 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCNKAP51800 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.5■□□□□ 0.71
CLCNKAP51800 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLCNKAP51800 KRT16P6-202ENST00000425692 1426 ntBASIC19.5■□□□□ 0.71
CLCNKAP51800 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 AL512408.1-201ENST00000569378 2000 ntBASIC19.49■□□□□ 0.71
CLCNKAP51800 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLCNKAP51800 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCNKAP51800 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 AC239809.2-201ENST00000415381 517 ntBASIC19.49■□□□□ 0.71
CLCNKAP51800 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLCNKAP51800 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.49■□□□□ 0.71
CLCNKAP51800 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCNKAP51800 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.49■□□□□ 0.71
CLCNKAP51800 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.49■□□□□ 0.71
CLCNKAP51800 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.49■□□□□ 0.71
CLCNKAP51800 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLCNKAP51800 AL023875.1-201ENST00000640777 796 ntBASIC19.49■□□□□ 0.71
CLCNKAP51800 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLCNKAP51800 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCNKAP51800 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCNKAP51800 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCNKAP51800 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCNKAP51800 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.48■□□□□ 0.71
CLCNKAP51800 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CLCNKAP51800 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 LINC01006-201ENST00000333319 2292 ntBASIC19.48■□□□□ 0.71
CLCNKAP51800 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.48■□□□□ 0.71
CLCNKAP51800 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLCNKAP51800 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.48■□□□□ 0.71
CLCNKAP51800 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.48■□□□□ 0.71
CLCNKAP51800 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.48■□□□□ 0.71
CLCNKAP51800 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCNKAP51800 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLCNKAP51800 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLCNKAP51800 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCNKAP51800 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCNKAP51800 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms